We are a full-service Bioinformatics provider, with services available for analysis of all kinds of high-throughput data, whether generated in house (at one of the UHN Genomics facilities) or externally. A basic data analysis package is available for on a per project basis. Discussion regarding the analysis of your genomics project and experimental design assessments are complimentary.
Pipelines for analysis should be specifically defined to meet the particular needs of your project but in general it can include:
Advanced high-throughput sequencing data analysis is also quoted on a per project basis. Advanced data analysis can include:
Our group manage UHN HPC clusters. Our clusters contain thousands of cores and several PB storage. Researchers are processing data and performing complex calculations every day on the clusters such as NGS data analysis and machine learning. We also manage software stacks and data sets on the clusters. If you want to use HPC services or have issues on the cluster, please contact firstname.lastname@example.org . Please note, the HPC service is for UHN researchers only.
Please use an FTP client that supports SFTP connections (e.g. FileZilla, sftp or lftp). Enter the Host ip address, port number, username and password provided to you via email. The account is usually valid for 14 days. Please download your data at your earliest convenience and let us know if you have problems downloading the data.
Bioinformatics Core Facility Director
Associate Director, HPC4Health
Core Facility Manager
Bioinformatics & HPC Systems
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